| air_temperature_regimen |
Information about treatment involving an exposure to varying temperatures |
| ancestral_data |
Information about either pedigree or other description of ancestral informati... |
| antibiotic_regimen |
Information about treatment involving antibiotic administration |
| biological_replicate_sample_group_name |
Samples that are biological replicates should have the same group name |
| biosafety_material_category |
Choose from Algae, Animal, Archaea, Bacteria, Fungi, Plant, Plasmid, Protist,... |
| biotic_regimen |
Information about treatment involving use of biotic factors |
| broad_scale_environmental_context |
The major environmental system the sample or specimen came from |
| chemical_administration |
List of chemical compounds administered to the host or site where sampling oc... |
| chemical_mutagen |
Treatment involving use of mutagens |
| collection_date_and_time |
The time of sampling, either as an instance or interval |
| combined_tissue_description |
The number and relationship between tissues if multiple tissue samples were c... |
| depth_meters |
The vertical distance (in meters) below local surface |
| developmental_stage |
The developmental stage of the plant from which the tissue was sampled |
| elevation_meters |
Elevation (in meters) of the sampling site as measured by the vertical distan... |
| environmental_medium |
The environmental material(s) immediately surrounding the sample at time of s... |
| estimated_genome_size_mb |
Estimated genome size of the primary species being sampled, between 1-100000 |
| experimental_time_point_description |
Description of the time point sampled |
| experimental_time_point_number |
Integer number representing the sequential numbering of time points |
| fertilizer_administration |
Information about treatment involving the use of fertilizers |
| fungicide_regimen |
Information about treatment involving use of fungicides |
| gaseous_environment |
Use of conditions with differing gaseous environments |
| gc_content_percent |
Estimated GC content of the genome of the primary species being sampled |
| genetic_modification |
Genetic modifications of the genome of an organism |
| genus |
Genus of the primary organism being sampled |
| geographic_location_latitude |
The geographical origin of the sample as defined by latitude |
| geographic_location_longitude |
The geographical origin of the sample as defined by longitude |
| geographic_location_region_and_locality |
The geographical origin of the sample as defined by country or sea name follo... |
| germplasm_collection_and_id |
Culture collection name and ID from which the original plant germplasm was so... |
| growth_facility |
Type of facility where the sampled plant was grown |
| growth_hormone_regimen |
Information about treatment involving use of growth hormones |
| growth_medium |
General specification of the media for growing the plants or tissue cultured ... |
| growth_medium_composition |
Detailed description of the makeup of the plant growth medium |
| harvest_to_preservation_time |
The time between sampling and sample preservation, minutes |
| herbicide_regimen |
Information about treatment involving use of herbicides |
| humidity_regimen |
Information about treatment involving an exposure to varying degree of humidi... |
| inoculation_method |
Method and material used for inoculation or infiltration with a biotic agent |
| insecticide_regimen |
Information about treatment involving use of insecticides |
| isolate |
Isolate or mutant name |
| last_light_transition_type |
The most recent light transition before sampling |
| light_regimen |
Information about treatment involving an exposure to light |
| local_environmental_context |
The entity or entities in the sample's local vicinity |
| mechanical_damage |
Information about any mechanical damage exerted on the plant |
| ncbi_taxonomy_id |
Unique identifier from the NCBI taxonomy database |
| observed_host_symbionts |
The taxonomic name of organism(s) found living in symbiosis with the specific... |
| other_treatment_regimen |
Information about treatments not captured by other available treatment catego... |
| perturbation |
Type of perturbation coupled with perturbation regimen |
| plant_age |
The age of the plant from which the tissue was sampled |
| plant_sex |
Sex of the reproductive parts on the whole plant |
| plate_location |
Required if samples provided in a plate |
| ploidy |
The ploidy level of the genome |
| proposal_id |
Proposal identifier |
| radiation_regimen |
Information about treatment involving exposure to a particular radiation regi... |
| rainfall_regimen |
Information about treatment involving an exposure to a given amount of rainfa... |
| reference_genome |
Reference genome and annotation to be used for analysis |
| salt_regimen |
Information about treatment involving use of salts as supplement |
| sample_contact_name |
Contact person for the sample |
| sample_container |
Select tube or plate |
| sample_disease_stage |
Stage of the disease at the time of sample collection |
| sample_disease_status |
List of diseases with which the subject has been diagnosed at time of sample ... |
| sample_id |
Unique identifier assigned to a material sample |
| sample_material_processing |
A brief description of any processing applied to the sample |
| sample_name |
A local identifier or name for the material sample |
| sample_preservation_method |
The method employed for preserving or fixing the tissue |
| sample_size |
The total amount or size of sample collected |
| sample_storage_temperature_celsius |
Temperature at which sample was stored (in degrees Celsius) |
| seq_project_id |
Project identifier, prefilled |
| seq_project_name |
Name of the project within which the sequencing was organized |
| seq_project_pi_name |
Principal investigator name for the sequencing project |
| species |
Species of the primary organism being sampled |
| strain_variety_or_cultivar |
Name or ID of the cultivar, variety, strain, or other similar designation |
| temperature_celsius |
Temperature (in degrees Celsius) of the sample at time of sampling |
| test_value |
An example enumerated value for testing purposes |
| time_after_last_light_transition |
The time between sampling and the most recent light transition |
| time_post_inoculation |
The time between inoculation with the biotic agent and sample collection |
| tissue |
Detailed description of the organ or type of tissue sampled |
| tissue_contact_name |
Contact person for tissue-related questions |
| tissue_plant_ontology_term |
Plant ontology term corresponding to plant structure sampled |
| tube_or_plate_label |
Must be unique across all tubes and plates, and <20 characters |
| watering_regimen |
Information about treatment involving an exposure to watering frequencies |